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Kinetic Radioligand Binding Assays

Kinetic radioligand binding assays analyze the rates at which radioligands and receptors bind to and dissociate from one another. Providing comprehensive radiolabeling services and supporting the development of RDCs with high-quality data, Alfa Cytology offers radioligand binding assay services, including kinetic radioligand binding assays. These advanced studies are critical for quantitatively characterizing the real-time binding interactions between a radiolabeled molecule and its biological target, delivering essential parameters for lead optimization and candidate selection in drug discovery and development.

Overview of Kinetic Radioligand Binding Assays

Kinetic radioligand binding assays are used to calculate the rates of association (Kon) and dissociation (Koff) of a radioligand to its specific receptor, enzyme, or other macromolecular target. When compared to equilibrium binding assays, which provide a snapshot of affinity (Kd), kinetic assays examine the binding event over time. This time-resolved analysis is important. Indeed, the residence time of a drug on its target is becoming more acknowledged as a vital factor regarding the in vivo efficacy and duration of action, and is often a more viable correlate to the pharmacological activity than affinity alone.

Use dynamic simulation to analyze the measured kinetics.Fig.1 Measured kinetics are analyzed using a dynamic simulation. (Bäck, T., et al., 2024)

Applications of Kinetic Radioligand Binding Assays

Lead Optimization

Directing medicinal chemistry efforts through in-depth kinetic structure-activity relationships, enabling the selection of compounds with optimal target residence times alongside binding affinity.

Candidate Selection Profiling

Determining and predicting in vivo pharmacokinetic and pharmacodynamic profiles using kinetic parameters helps provide the essential information needed to choose promising candidates.

Mechanism of Action Studies

Identifying the distinct effects on binding and unbinding rates to differentiate competitive, allosteric, and irreversible binding mechanisms.

Target Engagement Validation

Confirming and quantifying the interaction of a novel compound with its intended biological target in a native or recombinant system.

Our Services

Alfa Cytology offers full-service, customized kinetic radioligand binding assay services, providing solutions unique to each project's needs. Comprehensive solutions span from the development and validation of the assay to the performance of high-throughput screening and/or mechanistic studies. All studies are conducted in compliance with industry best practices, ensuring data integrity, precision, and regulatory readiness.

Custom Solution for Kinetic Radioligand Binding Assays

Recognizing the unique challenges presented by different ligand classes, we specialize in developing and optimizing kinetic radioligand binding assays for diverse radioligands.

Small Molecule-based Radioligands

Experience with a wide range of targets, including GPCRs, ion channels, kinases, and nuclear receptors, utilizing tritium (3H) labels, or carbon-14 (14C) where appropriate.

Antibody-based Radioligands

Specialized protocols for characterizing the binding kinetics of monoclonal antibodies, antibody fragments, and other protein scaffolds, often employing iodine-125 or other suitable isotopes.

Peptide-based Radioligands

Capabilities for assessing the kinetics of peptide-receptor interactions, crucial for oncology and metabolic disease research.

Workflow for Kinetic Radioligand Binding Assay of Antibody-based Radioligands

  • Project Design and Optimization
    The first step concentrates on determining the best conditions for the specific antibody-based radioligand and target interaction. The parameters, such as target density (receptor expression on the cells or purified antigen concentration), buffer composition, incubation temperature, and time points for sampling, are carefully tailored. The immunoreactive fraction and the specific activity of the radiolabeled antibody are determined to assess reagent quality.
  • Kinetic Binding Assay Procedure
    • Association Assay: After the best conditions are established, the association kinetics are determined by mixing a fixed amount of antibody-based radioligand with the target system. At specific time points, samples are taken, and the samples are collected and processed by vacuum filtration using glass fiber filters, or by other appropriate separation methods to determine the amount of binding. The radioactivity that is retained on the filters is measured by a gamma counter and represents the antibody that is bound to the target. Non-specific binding at each time interval is measured with parallel samples that contain excess unlabeled antibody.
    • Dissociation Assay: Dissociation kinetics are started through either infinite dilution or competitive displacement with an excess of displacing unlabeled antibody after reaching binding equilibrium. The decrease in specifically bound radioactivity is measured over time with successive sampling and the separation of bound/free radioligand.
  • Data Analysis
    Specific binding values, derived by subtracting non-specific from total binding at each time point, are subjected to nonlinear regression analysis. Data are fitted to appropriate kinetic models to obtain the association and dissociation rates, denoted by the parameters Kon and Koff, respectively.
  • Reporting and Deliverables
    Interpretation of all relevant data and expert analyses supporting decisions for the development of the drug is provided in the comprehensive final report at the study's completion.

Case Study: Kinetic Radioligand Binding Assay

A kinetic radioligand binding assay was performed to characterize the binding properties of [3H]-small molecule to the adenosine A1 receptor. The assay consisted of association and dissociation phases. For association, membrane preparations were incubated with a fixed concentration of [3H]-labeled small molecule at 30°C, and specific binding was measured at regular intervals over 3 hours. For dissociation, membranes were first pre-incubated with the radioligand to reach equilibrium. Dissociation was then initiated by adding a vast excess of an unlabeled ligand, and the remaining bound radioligand was quantified periodically over 7 hours to ensure complete dissociation. Non-specific binding, determined in the presence of an excess of the unlabeled ligand, was subtracted from total binding to calculate specific binding in all experiments.

Item Group Description
Association Assay Total Binding [3H]-ligand + Receptor
Incubated together, and samples were taken at multiple time points to measure the increase in binding over time until equilibrium was reached.
Non-specific Binding [3H]-ligand + Receptor + Excess unlabeled ligand
Incubated together, and samples were taken at the same time points as the total binding tubes.
Dissociation Assay Total Binding Pre-equilibrated [3H]-ligand-Receptor complex + Excess unlabeled ligand (added at t=0)
Dissociation was initiated at t=0 by adding an excess of unlabeled ligand. Samples were taken at multiple time points after this addition.
Non-specific Binding Pre-equilibrated mixture of [3H]-ligand, Receptor, and Excess unlabeled ligand
Excess unlabeled ligand was present throughout pre-equilibration and dissociation. Samples were taken at matched time points to measure the background signal.

The kinetic binding profile of [3H]-small molecule at the human adenosine A1 receptor is shown in Fig. 2. In the association phase, specific binding increased time-dependently until equilibrium was established (Fig. 2A). In the dissociation experiment, the addition of an excess unlabeled ligand prompted a rapid and complete decline in specific binding (Fig. 2B). The observed data were fitted to determine the association rate constant (Kon) and dissociation rate constant (Koff).

Kinetic radioligand binding assay.Fig.2 The association of [3H]-ligand to the human adenosine A1 receptor (A). The dissociation of [3H]-ligand from the human adenosine A1 receptor (B).

Why Choose Us?

A partnership is offered that combines scientific depth with operational excellence, assuring that essential kinetic data is produced with excellence and dependability.

  • Deep Expertise
    Hands-on expertise in the design, execution, and interpretation of advanced kinetic binding studies across a wide array of target classes.
  • Tailored Solutions
    Designed and tailored not just off-the-shelf protocols, but also your assay optimization for your specific radioligand, target, and project needs.
  • Robust Quality
    Implementation of rigorous quality control measures and the use of validated protocols to ensure reproducible and reliable results.
  • Integrated Services
    Integration with our radiolabeling services ensures a consistent supply of high-specific-activity radioligands for uninterrupted study progression.

Focused on innovative approaches and profound knowledge in kinetic radioligand binding, Alfa Cytology delivers the critical data to assess the intricacies of your drug-target interactions and enable strategic insights in your discovery and development programs. For detailed discussions on how our services can advance your specific project, please contact us.

Reference

  1. Bäck, Tom et al. "A Novel Method for Real-Time Quantification of Radioligand Binding to Living Tumor Cells In Vitro." Cancer biotherapy & radiopharmaceuticals 39.1 (2024): 75-81.

For research use only. Not intended for any clinical use.

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